Quick Start

EPTA has a -test flag, which allow users test commands and paramters with a build-in test file. All command of EPTA are usable under test mode, except -i [Input File].

Note

EPTA should be install under an independent Conda environment. Do not forget to activate it before start to run.

Simple Tree

epta -test

Annotate Domain

epta -test -pfam

Annotate Domain and Taxonomy

epta -test -pfam -tax -marktax

Annotate Domain, Taxonomy and Branch Information

epta -test -pfam -tax -marktax -bif -bl -bs -leg