Download

Before Installation

EPTA needs Conda and Bioconda channel to complete the installation.

Download Conda:

Conda Download Tutorial

Mniconda Download (Recommended)

Anaconda Download

Add Bioconda Channel:

conda config --add channels defaults
conda config --add channels bioconda
conda config --add channels conda-forge

Bioconda Homepage

Install EPTA

Standalone Version (Linux):

conda create -n epta python=3.8
conda activate epta
conda config --set channel_priority flexible
conda install -c phillip404 epta -y

Lite version:

Linux & MacOS

conda create -n epta-lite python=3.8
conda activate epta-lite
conda config --set channel_priority flexible
conda install -c phillip404 epta-lite -y

Windows (>=Windows 10)

conda create -n epta-lite python==3.8
conda activate epta-lite
conda config --set channel_priority flexible
conda install -c phillip404 epta-lite --only-deps -y
pip install https://github.com/Phillip404/easy_protein_tree_annotating/raw/main/Packaging/Windows/epta-lite-1.0.tar.gz

Standalone Version For Windows 10 or Higher:

Windows 10 and higher supports Linux subsystem, thus a standalone version could be run under such a subsystem on Windows platform:

Standalone version Installation:

1. Open Microsoft Store

2. Search Ubuntu

3. Install Unbuntu

4. Type bash in Windows search bar and open it

5. Follow the tutorial above to install the Standalone version.

Run Standalone version:

1. Close all Linux subsystem instance

2. Download and install Xserver as graphic output connector from vcxsrv Download

3. Install Xserver in full mode

4. Open Xlaunch set it as following:

STEP 1:

STEP 2:

STEP 3:

Note

It is crucial to pick the option Disable access control in this step.

STEP 4:

5. Open bash window

6. Active EPTA environment and run EPTA